Complete mitochondrial genome profile of Randall’s threadfin bream, Nemipterus randalli and its phylogenetic analysis

Raj, Neenu and Sukumaran, Sandhya and Mukundan, Lakshmi and Jose, Anjaly and Mary, Sujitha and Nisha, K and Gopalakrishnan, A (2024) Complete mitochondrial genome profile of Randall’s threadfin bream, Nemipterus randalli and its phylogenetic analysis. Current Science, 127 (3). pp. 322-332. ISSN 0011-3891

Text Current Science_2024_Sandhya Sukumaran.pdf Download (2MB)

Abstract

We characterized the complete mitogenome of Nemipterus randalli and performed comparative mitogenomic analysis with previously determined mitochondrial genomes belonging to the family Nemipteridae. Using Sanger sequencing, we identified a 16,642 bp mitogenome containing 37 genes (13 protein-coding, 2 rRNA, 22 tRNA) and a non-coding region. Its gene organization, nucleotide composition, tRNA secondary structure and codon usage are similar to other Nemipteridae mitogenomes. The phylogenetic analysis indicated that Nemipteridae is a monophyletic group. The present study forms the basis for further studies on the population genetics, evolution and phylogeny of N. randalli and its family.

Item Type:	Article
Uncontrolled Keywords:	Mitogenome; Nemipterus randalli; nemipteridae; phylogeny; protein coding genes
Subjects:	Fish and Fisheries > Fish Genetics Demersal Fishes > Threadfin breams
Divisions:	CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division Subject Area > CMFRI > CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division Subject Area > CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division
Depositing User:	Arun Surendran
Date Deposited:	23 Aug 2024 05:21
Last Modified:	23 Aug 2024 05:21
URI:	http://eprints.cmfri.org.in/id/eprint/18766

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