Complete mitochondrial genome profile of Randall’s threadfin bream, Nemipterus randalli and its phylogenetic analysis

Raj, Neenu and Sukumaran, Sandhya and Mukundan, Lakshmi and Jose, Anjaly and Mary, Sujitha and Nisha, K and Gopalakrishnan, A (2024) Complete mitochondrial genome profile of Randall’s threadfin bream, Nemipterus randalli and its phylogenetic analysis. Current Science, 127 (3). pp. 322-332. ISSN 0011-3891

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Abstract

We characterized the complete mitogenome of Nemipterus randalli and performed comparative mitogenomic analysis with previously determined mitochondrial genomes belonging to the family Nemipteridae. Using Sanger sequencing, we identified a 16,642 bp mitogenome containing 37 genes (13 protein-coding, 2 rRNA, 22 tRNA) and a non-coding region. Its gene organization, nucleotide composition, tRNA secondary structure and codon usage are similar to other Nemipteridae mitogenomes. The phylogenetic analysis indicated that Nemipteridae is a monophyletic group. The present study forms the basis for further studies on the population genetics, evolution and phylogeny of N. randalli and its family

Item Type: Article
Uncontrolled Keywords: Mitogenome; Nemipterus randalli; nemipteridae; phylogeny; protein coding genes
Subjects: Fish Genetics
Demersal Fishes > Threadfin breams
Divisions: CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division
Subject Area > CMFRI > CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division
CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division
Subject Area > CMFRI-Kochi > Marine Biotechnology, Fish Nutrition and Health Division
Depositing User: Arun Surendran
Date Deposited: 09 May 2025 03:57
Last Modified: 09 May 2025 03:57
URI: http://eprints.cmfri.org.in/id/eprint/18543

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