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Ghosh, Shubhadeep and Dash, Gyanaranjan and Dash, Biswajit and Pradhan, Rajesh Kumar and Megarajan, Sekhar and Behera, Pralaya Ranjan and Ranjan, Ritesh and Dash, Swatipriyanka Sen and Das, Madhumita and Suresh, V V R and Gopalakrishnan, A and Jena, J K (2025) From ocean to cage: evaluating the culture feasibility of Black-spotted croaker (Protonibea diacanthus). Frontiers in Marine Science, 11. pp. 1-14. ISSN 2296-7745
Sukumaran, Sandhya and Vysakh, V G and Sebastian, Wilson and Gopalakrishnan, A and Dharani, Lalitha Hari and Pandey, Akhilesh and Kumar, Abhishek and Jena, J K (2024) Chromosome level genome assembly of the Asian green mussel, Perna viridis. Scientific Data, 11 (930). pp. 1-9. ISSN 2052-4463
Sukumaran, Sandhya and Sebastian, Wilson and Gopalakrishnan, A and Mathew, Oommen K and Vysakh, V G and Rohit, Prathibha and Jena, J K (2023) Sequence and de novo assembly of the genome of the Indian oil sardine, Sardinella longiceps. Scientific Data, 10 (565). ISSN 2052-4463
Jena, J K and Gopalakrishnan, A (2022) Seaweed farming and utilization (Brainstorming session). NAAS News, 22 (4). pp. 7-8.
Patil, Prasanna Kumar and Mishra, S S and Pradhan, P K and Manna, Sanjib Kumar and Abraham, T J and Solanki, Haresh G and Shahi, Neetu and Swain, Priyabrata and Sahoo, Satya N and Avunje, Satheesha and Sharma, S R Krupesha and Geetha, R and Priyadharshini, Raju and Vinay, T N and Pani Prasad, K and Kumar, Ashok and Debnath, Dipesh and Panikkar, Preetha and Raja, Ramalingam A and Ramamoorthy, Saraswathy and Bhuvaneswari, T and Suman, Malik K and Sood, Neeraj and Kumar, Chandra B and Sanil, N K and Vinoth, P S and Alavandi, S V and Vijayan, K K and Jithendran, K P and Jena, J K (2022) Usage pattern of chemicals, biologicals and veterinary medicinal products in Indian aquaculture. Reviews in Aquaculture. pp. 1-26. ISSN 1753-5131
Basheer, V S and Vineesh, N and Bineesh, K K and Kumar, Rahul G and Mohitha, C and Venu, S and Kathirvelpandian, A and Gopalakrishnan, A and Jena, J K (2017) Mitochondrial signatures for identification of grouper species from Indian waters. Mitochondrial DNA, 28 (4). pp. 451-457.
Bineesh, K K and Gopalakrishnan, A and Akhilesh, K V and Sajeela, K A and Abdussamad, E M and Pillai, N G K and Basheer, V S and Jena, J K and Ward, Robert D (2016) DNA barcoding reveals species composition of sharks and rays in the Indian commercial fishery. Mitochondrial DNA. pp. 1-15.
Raja Swaminathan, T and Kumar, Raj and Dharmaratnam, Arathi and Basheer, V S and Sood, Neeraj and Pradhan, P K and Sanil, N K and Vijayagopal, P and Jena, J K (2016) Emergence of carp edema virus in cultured ornamental koi carp, Cyprinus carpio koi, in India. Journal of General Virology, 97. pp. 3392-3399.
Divya, P R and Vineesh, N and Kathirvelpandian, A and Mohitha, C and Basheer, V S and Gopalakrishnan, A and Jena, J K (2016) Identification and characterisation of microsatellite markers in narrow barred Spanish mackerel Scomberomorous commerson (Lacepede, 1800). Indian Journal of Fisheries, 63 (4). pp. 61-65.
Nagpure, N S and Mishra, A K and Rasal, A and Dubey, A and Kumar, A and Goswami, Mukunda and Ninawe, A S and Jena, J K (2016) Molecular and Cytogenitic characterization of fish cell lines and its application in aquatic research. National Academy Science Letters, 39 (1). pp. 11-16.
Kumar, Raj and Gopalakrishnan, A and Divya, P R and Basheer, V S and Singh, R K and Mohindra, Vindhya and Lal, Kuldeep Kumar and Jena, J K (2016) Population genetic structure of Macrobrachium rosenbergii (Palaemonidae) from Indian waters using mitochondrial ATPase 6/8 gene. Mitochondrial DNA. pp. 1-4.
Sajeela, K A and Gopalakrishnan, A and Basheer, V S and Bineesh, K K and Jena, J K (2015) Development and characterization of eighty-one microsatellite markers in Indian white shrimp, Fenneropenaeus indicus, through cross-amplification. Journal of Genetics, 94. pp. 43-50.
Divya, P R and Gopalakrishnan, A and Basheer, V S and Raja Swaminathan, T and Mohitha, C and Joy, Linu and Kumar, Raj and Manoj, P and Jena, J K (2015) Mitochondrial ATPase 6/8 genes to infer the population genetic structure of silver pomfret fish Pampus argenteus along the Indian waters. Mitochondrial DNA, Early . pp. 1-6.
Bineesh, K K and Gopalakrishnan, A and Jena, J K and Basheer, V S and Mohitha, C and Vineesh, N and Joslet, M and Pillai, N G K (2015) Molecular identification of Bigeyes (Perciformes, Priacanthidae) from Indian waters. Mitochondrial DNA, 27 (6). pp. 4638-4642. ISSN 1940-1744
Bineesh, K K and Mohitha, C and Vineesh, N and Basheer, V S and Joselet, M and Pillai, N G K and Jena, J K and Gopalakrishnan, A (2015) Molecular identification of three deepsea fish species of the genus Chelidoperca (Perciformes: Serranidae) from Indian waters. Indian Journal of Fisheries, 62 (4). pp. 104-108. ISSN 0970 - 6011
Bineesh, K K and Mohitha, C and Vineesh, N and Basheer, V S and Joselet, M and Akhilesh, K V and Pillai, N G K and Jena, J K and Gopalakrishnan, A (2015) Molecular identification of three deepsea fish species of the genus Chelidoperca (Perciformes: Serranidae) from Indian waters. Indian Journal of Fisheries, 62 (4). pp. 104-108.
Basheer, V S and Mohitha, C and Vineesh, N and Gopalakrishnan, A and Jena, J K (2015) Molecular phylogenetics of three species of the genus Rastrelliger using mitochondrial DNA markers. Molecular Biology Reports, 42 (4). pp. 873-879.
Jeena, N S and Gopalakrishnan, A and Radhakrishnan, E V and Kizhakudan, Joe K and Basheer, V S and Asokan, P K and Jena, J K (2015) Molecular phylogeny of commercially important lobster species from Indian coast inferred from mitochondrial and nuclear DNA sequences. Mitochondrial DNA. pp. 1-10.
Joy, Linu and Mohitha, C and Divya, P R and Gopalakrishnan, A and Basheer, V S and Jena, J K (2015) Weak genetic differentiation in cobia, Rachycentron canadum from Indian waters as inferred from mitochondrial DNA ATPase 6 and 8 genes. Mitochondrial DNA Part A. pp. 1-3.
Vij, Shubha and Kathireshan, P and Gopikrishna, G and Lau, D and Saju, J M and Shamsudheen, K V and Vinayakumar, K and Basheer, V S and Gopalakrishnan, A and Hossain, S Mohammed and Sridhar, S and Scaria, Vinod and Jena, J K and Ponniah, A G and Orbán, László (2014) Barcoding of Asian seabass across its geographic range provides evidence for its bifurcation into two distinct species. Frontiers in Marine Science Editorial Office, 1 (30). pp. 1-17.
Vij, Shubha and Purushothaman, K and Gopikrishna, G and Lau, D and Saju, J M and Shamsudheen, K V and Vinayakumar, K and Basheer, V S and Gopalakrishnan, A and Mohammad, S H and Sridhar, S and Vinod, S and Jena, J K and Ponniah, A G and Orbán, László (2014) Barcoding of Asian seabass across its geographic range provides evidence for its bifurcation into two distinct species. Frontiers in Marine Science, 1. pp. 1-14.
Mohitha, C and Joy, Linu and Divya, P R and Gopalakrishnan, A and Basheer, V S and Koya, Mohammed and Jena, J K (2014) Characterization of microsatellite markers in silver pomfret, Pampus argenteus (Perciformes: Stromateidae) through cross-species amplification and population genetic applications. Journal of Genetics, 93. pp. 89-93.
Akhilesh, K V and Bineesh, K K and Gopalakrishnan, A and Jena, J K and Basheer, V S and Pillai, N G K (2014) Checklist of Chondrichthyans in Indian waters. Journal of the Marine Biological Association of India, 56 (1). pp. 109-120.
Bineesh, K K and Akhilesh, K V and Sajeela, K A and Abdussamad, E M and Gopalakrishnan, A and Basheer, V S and Jena, J K (2014) DNA Barcoding Confirms the Occurrence Rare Elasmobranchs in the Arabian Sea of Indian EEZ. Middle-East Journal of Scientific Research, 19 (9). pp. 1266-1271.
Balasubramanian, C P and Cubelio, S S and Mohanlal, D and Ponniah, A G and Kumar, Raj and Bineesh, K K and Ravichandran, P and Gopalakrishnan, A and Mandal, A and Jena, J K (2014) DNA sequence information resolves taxonomic ambiguity of the common mud crab species (Genus Scylla) in Indian waters. Mitochondrial DNA. pp. 1-6.
Kathirvelpandian, A and Gopalakrishnan, A and Lakra, W S and Krishna, Gopal and Sharma, Rupam and Musammilu, K K and Basheer, V S and Jena, J K (2014) Microsatellite Markers to Determine Population Genetic Structure in the Golden Anchovy, Coilia dussumieri. Biochemical Genetics, 52 (5-6). pp. 296-309.
Kathirvelpandian, A and Gopalakrishnan, A and Lakra, W S and Krishna, Gopal and Sharma, Rupam and Divya, P R and Kumar, Raj and Jena, J K (2014) Mitochondrial ATPase 6/8 genes reveal genetic divergence in the Coilia dussumieri (Valenciennes, 1848) populations of north east and northwest coasts of India. Molecular Biology Reports, 41. pp. 3723-3731.
Bineesh, K K and Akhilesh, K V and Gopalakrishnan, A and Jena, J K (2014) Plectranthias alcocki, a new anthiine fish species (Perciformes: Serranidae) from the Arabian Sea, off southwest India. Zootaxa, 3785 (3). pp. 490-496.
Bineesh, K K and Akhilesh, K V and Abdussamad, E M and Pillai, N G K and Thiel, Ralf and Jena, J K and Gopalakrishnan, A (2014) Redescriptions of Chelidoperca investigatoris (Alcock, 1890) and Chelidoperca occipitalis Kotthaus, 1973 (Perciformes: Serranidae) from the south-west coast of India. Indian Journal of Fisheries, 61 (4). pp. 118-123.
Katiha, Pradeep K and Jena, J K and Pillai, N G K and Chakraborty, Chinmoy and Dey, M M (2005) Inland aquaculture in India: Past trend, present status and future prospects. Aquaculture Economics & Management, 9. pp. 237-264.
Jena, J K and Gopalakrishnan, A and Ravishankar, C N and Lal, Kuldeep Kumar and Das, B K and Das, P C and Panigrahi, A K and Shinoj, P and Madhu, V R (2022) Achievements in fisheries and aquaculture in Independent India. In: Indian Agriculture after Independence. Indian Council of Agricultural Research, New Delhi, pp. 168-208. ISBN 978-81-7164-256-4
Shinoj, P and Gopalakrishnan, A and Jena, J K (2020) Demographic change in marine fishing communities in India. In: Demographic change in Asian fishing communities – Drivers, outcomes and potential impacts. Food and Agriculture Organization of the United Nations, Bangkok, pp. 85-102.
Jena, J K and George, Grinson (2018) Small-scale Fisheries in India: An Appraisal. In: Small-scale Fisheries in South Asia. SAARC Agriculture Centre, Bangladesh, pp. 15-41. ISBN ISBN: 978-984-34-6007-3
Jena, J K and George, Grinson (2017) Climate and Climate Variability: Impact on Fisheries in Food and Nutritional Security. In: Agriculture under Climate Change. Allied Publishers, New Delhi, pp. 38-47. ISBN 978-93-85926-37-2
Ayyappan, S and Jena, J K and Lakra, W S and Srinivasa Gopal, T K and Gopalakrishnan, A and Vass, K K and Sahoo, P K and Chakraborty, Rina (2015) Fisheries Sciences. In: 100 Years of Agricultural Sciences In India. National Academy of Agricultural Sciences, New Delhi, pp. 329-410.
Ayyappan, S and Jena, J K (1999) Environmental Issues in Indian Freshwater Aquaculture. In: Aquaculture and the Environment. Asian Fisheries Society, Mangalore, pp. 13-31.
Jena, J K (2019) The Asian Fisheries Society (AFS) Year Book - 2019. Technical Report. The Asian Fisheries Society, Malaysia.
Bineesh, K K and Ragesh, N and Manjebrayakath, Hashim and Akhilesh, K V and Abdussamad, E M and Gopalakrishnan, A and Jena, J K (2013) Identification of deep sea fish species using the sagittal otolith from southwest coast of India. In: International Symposium on Greening Fisheries: towards green technologies in Fisheries, 21-23 May 2013, Kochi.
Bineesh, K K and Gopalakrishnan, A and Jena, J K and Akhilesh, K V and Basheer, V S and Pillai, N G K (2013) Sharks and rays in Indian commercial fisheries: need for revision of taxonomy. In: Regional Symposium on Ecosystem Approaches to Marine Fisheries & Biodiversity, October 27-30, 2013, Kochi.
Jena, J K and Ghosh, Shubhadeep and Pillai, Devika and Kumar, Prem and Basade, Yasmeen (2025) Book of Abstracts: 14th Asian Fisheries and Aquaculture Forum (14AFAF), 12-15 February 2025. Asian Fisheries Society (AFS), New Delhi. ISBN 978-81-7164-287-8
Dineshbabu, A P and Thomas, Sujitha and Kizhakudan, Shoba Joe and Zacharia, P U and Ghosh, Shubhadeep and Dash, Gyanaranjan and Vivekanandan, E and George, Grinson and Sivadas, M and Chellappan, Anulekshmi and Najmudeen, T M and Muktha, M and Sreenath, K R and Koya, Mohammed and Ratheesh Kumar, R and Divipala, Indira and Dash, Swatipriyanka Sen and Akhilesh, K V and Rajesh, K M and Roul, Subal Kumar and Nakhawa, A D and Bhendekar, S N and Pradhan, Rajesh Kumar and Geetha, R and Yousuf, K S S M and Mhadgut, Bala and Ninan, Roshen G and Santhi, M and Tandel, Swapnil and Ajith, S and Satish Kumar, M and Kishore, Nanda and Rahul, R and Prabhakar, M and Gopalakrishnan, A and Jena, J K (2024) Carbon Footprint of Marine Fisheries in India. CMFRI Special Publication (149). ICAR–Central Marine Fisheries Research Institute (CMFRI), Kochi.
Gopalakrishnan, A and Ravishankar, C N and Pravin, P and Jena, J K (2020) ICAR Technologies: High-Value Nutraceutical and Nutritional Products from Seaweeds. Indian Council of Agricultural Research, Kochi.
Gopalakrishnan, A and Divya, P R and Basheer, V S and Raja Swaminathan, T and Kathirvelpandian, A and Bineesh, K K and Kumar, Rahul G and Jena, J K (2012) Macro Flora & Fauna of the Gulf of Mannar a checklist. National Bureau of Fish Genetic Resources, Kochi. ISBN 978-81-905540-8-4
Jena, J K (1989) On the distribution and abundance of fry and juveniles of a few cultivable fishes in relation to certain environmental parameters at Cochin. Masters thesis, Cochin University of Science and Technology.
Gopalakrishnan, A and Joseph, T C and Baby, A and Sajeela, K A and Lalitha, K V and Thobias, P A and Basheer, V S and Kumar, Rahul G and Jena, J K (2013) Puntius denisonii mitochondrion, complete genome. [Dataset] (Unpublished)
Joseph, T C and Lalitha, K V and Baby, A and Gopalakrishnan, A and Thobias, P A and Basheer, V S and Sajeela, K A and Jena, J K (2012) Puntius chalakkudiensis mitochondrion, complete genome. [Dataset] (Unpublished)
